I:/RNAstructure/RNA_class/ProbScan.h File Reference

#include "RNA.h"
#include "../src/defines.h"
#include <vector>

Classes
struct	hp
struct	il
struct	bp
struct	mb
class	mb_element
class	ProbScan
Typedefs
typedef struct hp	hairpin_t
typedef struct il	internal_loop_t
typedef struct bp	basestack_t
typedef struct mb	multibranch_loop_t
Functions
hairpin_t	hairpin (double p, int i, int j)
internal_loop_t	internal_loop (double p, int i, int j, int k, int l)
basestack_t	basestack (double p, int i, int j, int k, int l)
multibranch_loop_t	multibranch_loop (int i, int j)
void	add_branch (multibranch_loop_t &mb, int k, int l)
void	show_hairpins (vector< hairpin_t >)
void	show_stacks (vector< basestack_t >)
void	show_internal_loops (vector< internal_loop_t >)
void	show_bulge_loops (vector< internal_loop_t >)
void	show_mbl (multibranch_loop_t mbl)
void	show_mb_element_array (vector< mb_element >)

---

Typedef Documentation

typedef struct bp basestack_t

typedef struct hp hairpin_t

typedef struct il internal_loop_t

typedef struct mb multibranch_loop_t

---

Function Documentation

void add_branch	(	multibranch_loop_t &	mb,
		int	k,
		int	l
	)

basestack_t basestack	(	double	p,
		int	i,
		int	j,
		int	k,
		int	l
	)

hairpin_t hairpin	(	double	p,
		int	i,
		int	j
	)

internal_loop_t internal_loop	(	double	p,
		int	i,
		int	j,
		int	k,
		int	l
	)

multibranch_loop_t multibranch_loop	(	int	i,
		int	j
	)

void show_bulge_loops

(

vector< internal_loop_t >

)

void show_hairpins

(

vector< hairpin_t >

)

void show_internal_loops

(

vector< internal_loop_t >

)

void show_mb_element_array

(

vector< mb_element >

)

void show_mbl

(

multibranch_loop_t

mbl

)

void show_stacks

(

vector< basestack_t >

)