#Data tables for asymmetric interior loops of size 3
#Free energies at 37 degrees for RNA
#Data Arrangement:
#For the 4x4 tables, each starting pair needs its own table.
#This is the AA table:
# 5' --> 3'
# X
# A A
# U U
# YA
# 3' <-- 5'
# Y->
# ----------------------------
# (X) A C G U
# | ----------------------------
# V
# (A) 3.7 3.7 3.7 3.7
# (C) 3.7 3.7 3.7 3.7
# (G) 2.6 2.6 2.6 2.6
# (U) 3.7 3.7 3.7 3.0
#An energy of "." is "infinity," i.e. not allowed.
# 5' --> 3'
X
A A
U U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A C
U G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
A G
U C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
A U
U A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A G
U U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A U
U G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A A
U U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A C
U G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
A G
U C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
A U
U A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A G
U U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A U
U G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A A
U U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A C
U G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
A G
U C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
A U
U A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A G
U U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A U
U G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
A A
U U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
A C
U G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
A G
U C
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
A U
U A
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
A G
U U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
A U
U G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
C A
G U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C C
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 2.3 1.1 2.3
C 2.3 2.3 2.3 2.3
G 1.7 2.3 0.8 2.3
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
C G
G C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 1.1 2.3
C 2.3 2.3 2.3 2.3
G 1.1 1.1 1.1 1.1
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
C U
G A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C G
G U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C U
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C A
G U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C C
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 1.7 1.1 2.3
C 2.3 2.5 2.3 2.3
G 1.1 2.3 1.1 2.3
U 2.3 2.2 2.3 1.5
# 5' --> 3'
X
C G
G C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 1.1 2.3
C 2.3 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
C U
G A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C G
G U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C U
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C A
G U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C C
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 0.8 1.1 1.1 1.1
C 2.3 2.3 2.3 2.3
G 1.2 1.1 1.1 1.1
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
C G
G C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.1 1.1 1.1 1.1
C 2.3 2.3 2.3 2.3
G 1.1 1.1 1.1 1.1
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
C U
G A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C G
G U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C U
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
C A
G U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
C C
G G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 1.1 2.3
C 2.5 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 1.5 1.7 1.5 1.4
# 5' --> 3'
X
C G
G C
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 1.1 2.3
C 2.3 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 1.5 1.5 1.5 1.5
# 5' --> 3'
X
C U
G A
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
C G
G U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
C U
G G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
G A
C U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G C
C G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 2.3 2.3
C 2.3 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
G G
C C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 2.3 2.1 2.3
C 2.3 2.3 2.3 2.3
G 1.1 1.1 1.1 1.1
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
G U
C A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G G
C U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 3.0 2.1 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G U
C G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G A
C U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G C
C G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 2.3 2.3
C 2.3 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
G G
C C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 2.3 2.3
C 2.3 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
G U
C A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G G
C U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G U
C G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G A
C U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G C
C G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.1 1.1 1.1 1.1
C 2.3 2.3 2.3 2.3
G 1.1 1.1 1.1 1.1
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
G G
C C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.2 1.1 1.1 1.1
C 2.3 2.3 2.3 2.3
G 1.1 1.1 1.1 1.1
U 2.3 2.3 2.3 1.5
# 5' --> 3'
X
G U
C A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G G
C U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.2 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G U
C G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G A
C U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
G C
C G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 2.3 2.3
C 2.3 2.3 2.3 2.3
G 1.1 2.3 1.1 2.3
U 1.5 1.5 1.5 1.5
# 5' --> 3'
X
G G
C C
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.3 2.3 2.3
C 2.3 1.9 2.3 2.3
G 1.1 2.3 1.1 2.3
U 1.5 1.5 1.5 1.5
# 5' --> 3'
X
G U
C A
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
G G
C U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 1.9 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
G U
C G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
U A
A U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U C
A G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U G
A C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U U
A A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U G
A U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U U
A G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U A
A U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U C
A G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U G
A C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U U
A A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U G
A U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U U
A G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U A
A U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U C
A G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U G
A C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U U
A A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U G
A U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U U
A G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U A
A U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U C
A G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
U G
A C
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
U U
A A
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U G
A U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U U
A G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
G A
U U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G C
U G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G G
U C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 3.0 2.1 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G U
U A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G G
U U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 3.7 2.1 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G U
U G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G A
U U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G C
U G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G G
U C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G U
U A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G G
U U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G U
U G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G A
U U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G C
U G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G G
U C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.2 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
G U
U A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G G
U U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.2 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G U
U G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
G A
U U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
G C
U G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
G G
U C
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 3.0 3.0
C 3.0 1.9 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
G U
U A
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
G G
U U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 1.9 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
G U
U G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 3.7 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U A
G U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U C
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U G
G C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U U
G A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U G
G U
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U U
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U A
G U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U C
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U G
G C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U U
G A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U G
G U
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U U
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U A
G U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U C
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U G
G C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 1.9 1.9 1.9
C 3.0 3.0 3.0 3.0
G 1.9 1.9 1.9 1.9
U 3.0 3.0 3.0 2.2
# 5' --> 3'
X
U U
G A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U G
G U
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U U
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.6 2.6 2.6
C 3.7 3.7 3.7 3.7
G 2.6 2.6 2.6 2.6
U 3.7 3.7 3.7 3.0
# 5' --> 3'
X
U A
G U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U C
G G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
U G
G C
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.0 3.0 1.9 3.0
C 3.0 3.0 3.0 3.0
G 1.9 3.0 1.9 3.0
U 2.2 2.2 2.2 2.2
# 5' --> 3'
X
U U
G A
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U G
G U
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0
# 5' --> 3'
X
U U
G G
YU
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 3.7 3.7 2.6 3.7
C 3.7 3.7 3.7 3.7
G 2.6 3.7 2.6 3.7
U 3.0 3.0 3.0 3.0